Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913826.1_cds_XP_016463818.1_56907
CDS Infomation

[gene=LOC107786830] [db_xref=GeneID:107786830] [protein=valine--tRNA ligase, mitochondrial 1-like] [protein_id=XP_016463818.1] [location=join(3876..3878,3971..4021,4103..4177,4744..4803,5062..5231,5352..5424,7375..7440,7515..7598,7717..7794,8077..8160,8273..8352,8513..8570,8658..8960,9043..9213,13385..13584,13976..14381,14661..14912,15002..15502,15975..16081,17714..17813,18719..18867,19509..19674)] [gbkey=CDS]
Sequence

ATGGCTGACTCGTCGGGTAAATCACACGAAACAGTAAAAAATTGTAAAACGGAGGCGGCG
GCGGCAGCATCAGACGGAAAGGAATTAACCCCAGAAGAGCTCGAAAAGAAAAAGAAAAAG
GAAGAAAAGGCTAAAGAGAAAGAGTTGAAAAAACTCAAGGCTGCGCAAAAAGCGGAAGCA
GCAAAAAAGGCACAGGGCGCCTCCAATGTGTCAAAGACTGCTAAGAAGAAGATCTCAAAA
AGGGAAGGTGAAGAGGAGAACCCTGAAGATTATGTTGATCCAGAAACACCTCTGGGGGAG
AAGAAGAGGCTCTCCCGTCAAATGGCAAAGACTTTTAATCCCAGTGCTGTAGAGAAATCG
TGGTATTCTTGGTGGGAGAAGTCCAATTTCTTCGTTGCAGACCCGAACAGCTCTAAACCA
CCTTTTGTGATTGTCTTGCCCCCACCAAATGTGACTGGTGCTCTCCATATTGGACATGCA
CTCACTGCTGCCATCGAGGATACAATTATTCGTTGGCGGAGAATGTCCGGATACAATACC
TTGTGGGTGCCAGGGATGGATCATGCTGGGATCGCAACACAGGTTGTTGTGGAGAAGAAG
ATCATGCGGGAGAGAAATTTGACTAGACATGATATTGGTCGTGAGAACTTTGTATCTGAA
GTCTGGAACTGGAAGAATGAGTATGGAGGTACTATACTGCAGCAATTACGTCGCTTGGGT
GCGTCACTTGATTGGTCTCGCGAGTGCTTTACCATGGATGAGAAAAGGTCTAAAGCTGTT
ACTGAAGCATTTGTCAGGCTGTCCAATGAAGGTCTTATATACAGGGCTCCACGTATGGTG
CATTGGGATTGTGTCTTGCGTACTGCAATATCTGATATTGAGGTTGAATATACAGACATC
AAAGAGAGGACACTTCTGAGTGTTCCTGGATATGAGGAGCCTGTGGAGTTTGGGGTGCTG
ACATCATTTGCTTACCCCTTGGAAGATGGCCTTGGTGAAATTGTTGTGGCGACTACCAGA
ATTGAAACAATGCTTGGTGATACTGCAATTGCTATACATCCTGAAGACAAAAGATATAGT
CACCTTCATGGGAAATTTGCTATTCATCCATTCAATGGACGAAGGCTTCCAATAGTTTGT
GATGAAATACTTGTAGATATGAACTTTGGGACTGGTGCTGTTAAGATAACTCCAGCCCAT
GATCCAAATGATTTCGAGGTTGGACAGCGTCACAAACTTGAATTCATAAGTATTTTTACT
GATGATGGGAATATAAATAGTAATGCGGGCCCAGACTTTGAAGGAATGCCTCGTTTCAAA
GCTCGTGTCGCTGTGACTGAAGCTCTGAAGGAAAAGGGTCTCTACAGGGATGCTAAGAAT
AACGAGATGCGCCTTGGGATTTGTTCAAGAAGTAATGATGTGGTGGAACCTCTTATAAAG
CCCCAGTGGTTTGTCAACTGCAAAAGTATGGCCAAAGAGGCTCTGGATGCTGTTACTGAT
GATGATAACCGGAAAATGGAGATCATCCCAAAGCAATATGTTGCTGAATGGAAAAGATGG
CTTGAGAATATCCGTGATTGGTGCATCTCAAGGCAGCTTTGGTGGGGTCATCGTATTCCA
TCTTGGTATGTGACACTGCATGATGACAAGCAGAAGGAGTTTGGTGTATGCGACGATCAC
TGGATTGTCGCTAGGAATGAAGAAGAGGCTCGAGATTTGGCTTGTAGGAAATTTTCAGGG
AAGGAGATTGTTGGGCTCACTCAAGATCCAGATGTGCTGGATACCTGGTTTTCTTCTGGT
CTTTTTCCATTATCTGTATTGGGGTGGCCAGATGATACTGCAGATTTCAAAACATTTTAT
CCAACTTCAGTTCTTGAAACTGGACATGATATTCTCTTCTTCTGGGTTGCACGTATGGTT
ATGTTGGGAATAAAGCTGGGAGGTGATGTACCATTTACGAAGGTTTATTTGCATCCAATG
ATCCGTGATGCACATGGACGTAAGATGTCCAAGTCATTGGGAAATGTTATTGATCCTCTT
GAAGTTATTAATGGAATTGAACTTGCTGGTCTTCATAAGAGATTAAAGGAGGGTAACCTG
GACGCCAAAGAATTTGAGAGGGCAAAAGAGGGACAGGCAAAGGACTTTCCTAGTGGTATT
CCTGAATGTGGTGCAGATGCTCTTCGATTTGCCCTAGTCTCATACACTGCCCAGTCCGAT
AAGATCAATCTGGATATCCAAAGAGTGGTTGGGTATCGTCAATGGTGTAACAAATTGTGG
AATGCCATTAGGTTTGCCATGAGTAAACTGGGTGAAGATTACACCCCTCCAACAAAGATA
GTTCCTCATGAAATGCCTTTTAGCTGCCAGTGGATACTCTCAGCACTTAACAAGGCCATT
GCGAAAACTGTCTTGTCCCTGGAATCTTATGATTTCTCTGATGCAGCAACAGCGGTATAT
TCGTGGTGGCAGTTCCAGTTGTGTGATGTGTTCATAGAAGTAATCAAGCCATACTTTGCC
GGTGATAATCCTGAATTTGTATCTGCAAGAAGATTTGCTCAAGACACCCTGTGGCTTTGT
TTAGATAACGGATTGCGATTACTCCATCCATTTATGCCATTTGTCACCGAAGAATTATGG
CAGCGTCTTCCTGCTAGCGGGAATTCTATAAAGAAAGAATCAATAGTGATAAGTGATTAT
CCTTCAACTATAGAGAGCTGGAATAATGATAGCGTGGAAGCTGAGATGGAAAAAGTATCA
TCCATTGTTAAAGGATTGAGGTCGAAGAGAGCATTGTTGCCTCCAAAGGAGAGATTTGCA
AGGCGTGAAGCATTTGTGCTTTGCCGGACAAACGATATTGTGGAGACGATAAAAAGCCGT
GAACTGGAGATTTGCACTCTAGCCGCATTGTCATCTTTGAAGGTCTCAAGTGACAGTGAG
GCAGCTCCAACTCAGTGGCTGACAGAAGTTGTGGATGAGTCTGTCACAGTTTTTCTCGAG
GAAAAAGGGACTACTATTAACCCAAAGGATGAAGTTGAAAGGCTCAAAAAGAAGAGAGAA
GAGACGAGGAAGCAATATGAGAACTTAAATAAAGTCATGAGTGCCTCTGGCTACAAAGAG
AAAGTTCCACCTAACGTCCATGAAGACAATACATCGAAACTTGGTGTGCTCAAGCAAGAA
CTGGAATCATTTGAAGAGAATATTGAGCGTCTCAGACGCCAAATTGAGGCACTATAG

Peptide Sequence

PEP ID

XP_016463818.1
PEP Infomation

PREDICTED: valine--tRNA ligase, mitochondrial 1-like [Nicotiana tabacum]
Sequence

MADSSGKSHETVKNCKTEAAAAASDGKELTPEELEKKKKKEEKAKEKELKKLKAAQKAEA
AKKAQGASNVSKTAKKKISKREGEEENPEDYVDPETPLGEKKRLSRQMAKTFNPSAVEKS
WYSWWEKSNFFVADPNSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWRRMSGYNT
LWVPGMDHAGIATQVVVEKKIMRERNLTRHDIGRENFVSEVWNWKNEYGGTILQQLRRLG
ASLDWSRECFTMDEKRSKAVTEAFVRLSNEGLIYRAPRMVHWDCVLRTAISDIEVEYTDI
KERTLLSVPGYEEPVEFGVLTSFAYPLEDGLGEIVVATTRIETMLGDTAIAIHPEDKRYS
HLHGKFAIHPFNGRRLPIVCDEILVDMNFGTGAVKITPAHDPNDFEVGQRHKLEFISIFT
DDGNINSNAGPDFEGMPRFKARVAVTEALKEKGLYRDAKNNEMRLGICSRSNDVVEPLIK
PQWFVNCKSMAKEALDAVTDDDNRKMEIIPKQYVAEWKRWLENIRDWCISRQLWWGHRIP
SWYVTLHDDKQKEFGVCDDHWIVARNEEEARDLACRKFSGKEIVGLTQDPDVLDTWFSSG
LFPLSVLGWPDDTADFKTFYPTSVLETGHDILFFWVARMVMLGIKLGGDVPFTKVYLHPM
IRDAHGRKMSKSLGNVIDPLEVINGIELAGLHKRLKEGNLDAKEFERAKEGQAKDFPSGI
PECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAIRFAMSKLGEDYTPPTKI
VPHEMPFSCQWILSALNKAIAKTVLSLESYDFSDAATAVYSWWQFQLCDVFIEVIKPYFA
GDNPEFVSARRFAQDTLWLCLDNGLRLLHPFMPFVTEELWQRLPASGNSIKKESIVISDY
PSTIESWNNDSVEAEMEKVSSIVKGLRSKRALLPPKERFARREAFVLCRTNDIVETIKSR
ELEICTLAALSSLKVSSDSEAAPTQWLTEVVDESVTVFLEEKGTTINPKDEVERLKKKRE
ETRKQYENLNKVMSASGYKEKVPPNVHEDNTSKLGVLKQELESFEENIERLRRQIEAL

Transcript Sequence

Gene sequence data has not been registered.